Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 AC025580.3-201ENST00000617932 1424 ntBASIC11.88□□□□□ -0.51
TCRAP04437 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 FOXO1B-201ENST00000504678 1527 ntBASIC11.88□□□□□ -0.51
TCRAP04437 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRAP04437 AL139010.1-201ENST00000454878 894 ntBASIC11.88□□□□□ -0.51
TCRAP04437 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 RNA5SP410-201ENST00000516285 106 ntBASIC11.88□□□□□ -0.51
TCRAP04437 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.88□□□□□ -0.51
TCRAP04437 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRAP04437 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRAP04437 HNRNPUP1-201ENST00000554987 333 ntBASIC11.88□□□□□ -0.51
TCRAP04437 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRAP04437 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.88□□□□□ -0.51
TCRAP04437 AC097359.3-201ENST00000603982 1210 ntBASIC11.88□□□□□ -0.51
TCRAP04437 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 AL031008.1-201ENST00000619963 541 ntBASIC11.88□□□□□ -0.51
TCRAP04437 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TCRAP04437 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.88□□□□□ -0.51
TCRAP04437 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 AC126335.2-201ENST00000623362 4637 ntBASIC11.88□□□□□ -0.51
TCRAP04437 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TCRAP04437 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TCRAP04437 BX640514.1-201ENST00000583223 1918 ntBASIC11.88□□□□□ -0.51
TCRAP04437 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TCRAP04437 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 CICP11-201ENST00000434745 2827 ntBASIC11.87□□□□□ -0.51
TCRAP04437 BCAR1-209ENST00000546196 1340 ntBASIC11.87□□□□□ -0.51
TCRAP04437 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 AC005840.4-201ENST00000541242 2494 ntBASIC11.87□□□□□ -0.51
TCRAP04437 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 REXO1L2P-201ENST00000425429 2069 ntBASIC11.87□□□□□ -0.51
TCRAP04437 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms