Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GAPDHP04406 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.09□□□□□ -0.31
GAPDHP04406 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
GAPDHP04406 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.09□□□□□ -0.31
GAPDHP04406 AL353705.2-201ENST00000428243 662 ntBASIC13.09□□□□□ -0.31
GAPDHP04406 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 RBPMS2P1-201ENST00000437762 623 ntBASIC13.09□□□□□ -0.31
GAPDHP04406 AC023141.5-201ENST00000458585 616 ntBASIC13.09□□□□□ -0.31
GAPDHP04406 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.09□□□□□ -0.31
GAPDHP04406 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.09□□□□□ -0.31
GAPDHP04406 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GAPDHP04406 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
GAPDHP04406 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 AC023511.2-201ENST00000618803 211 ntBASIC13.09□□□□□ -0.31
GAPDHP04406 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.09□□□□□ -0.31
GAPDHP04406 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.09□□□□□ -0.31
GAPDHP04406 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.09□□□□□ -0.31
GAPDHP04406 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
GAPDHP04406 AC097376.2-205ENST00000610159 5334 ntBASIC13.09□□□□□ -0.31
GAPDHP04406 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GAPDHP04406 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GAPDHP04406 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
GAPDHP04406 AC092127.1-201ENST00000567093 3455 ntBASIC13.08□□□□□ -0.31
GAPDHP04406 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 SBF1P1-201ENST00000444527 5631 ntBASIC13.08□□□□□ -0.32
GAPDHP04406 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
GAPDHP04406 FAM58DP-201ENST00000428076 619 ntBASIC13.08□□□□□ -0.32
GAPDHP04406 AL139010.1-201ENST00000454878 894 ntBASIC13.08□□□□□ -0.32
GAPDHP04406 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.08□□□□□ -0.32
GAPDHP04406 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.08□□□□□ -0.32
GAPDHP04406 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.08□□□□□ -0.32
GAPDHP04406 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 AL596442.2-201ENST00000610240 980 ntBASIC13.08□□□□□ -0.32
GAPDHP04406 AC009093.7-201ENST00000623853 1223 ntBASIC13.08□□□□□ -0.32
GAPDHP04406 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GAPDHP04406 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAPDHP04406 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.08□□□□□ -0.32
GAPDHP04406 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.07□□□□□ -0.32
GAPDHP04406 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAPDHP04406 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAPDHP04406 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.07□□□□□ -0.32
GAPDHP04406 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.07□□□□□ -0.32
GAPDHP04406 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.07□□□□□ -0.32
GAPDHP04406 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms