Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL592076.1-201ENST00000424448 303 ntBASIC17.46■□□□□ 0.39
ALDH1A1P00352 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 HLA-J-204ENST00000495278 958 ntBASIC17.46■□□□□ 0.39
ALDH1A1P00352 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 MIR4683-201ENST00000579659 81 ntBASIC17.46■□□□□ 0.39
ALDH1A1P00352 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 AC242376.2-201ENST00000619355 883 ntBASIC17.46■□□□□ 0.39
ALDH1A1P00352 AC002472.3-201ENST00000640124 621 ntBASIC17.46■□□□□ 0.39
ALDH1A1P00352 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALDH1A1P00352 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ALDH1A1P00352 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.46■□□□□ 0.38
ALDH1A1P00352 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ALDH1A1P00352 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.46■□□□□ 0.38
ALDH1A1P00352 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ALDH1A1P00352 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ALDH1A1P00352 AC022188.1-201ENST00000620960 1664 ntBASIC17.45■□□□□ 0.38
ALDH1A1P00352 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 AC005052.1-201ENST00000625181 2492 ntBASIC17.45■□□□□ 0.38
ALDH1A1P00352 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 AC012441.2-201ENST00000444843 739 ntBASIC17.45■□□□□ 0.38
ALDH1A1P00352 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 MIR6842-201ENST00000612539 65 ntBASIC17.45■□□□□ 0.38
ALDH1A1P00352 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALDH1A1P00352 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ALDH1A1P00352 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 IGHV3-37-201ENST00000518544 340 ntBASIC17.44■□□□□ 0.38
ALDH1A1P00352 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 DUX4L47-201ENST00000566374 394 ntBASIC17.44■□□□□ 0.38
ALDH1A1P00352 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.44■□□□□ 0.38
ALDH1A1P00352 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALDH1A1P00352 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
ALDH1A1P00352 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.43■□□□□ 0.38
ALDH1A1P00352 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.43■□□□□ 0.38
ALDH1A1P00352 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.43■□□□□ 0.38
ALDH1A1P00352 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.43■□□□□ 0.38
ALDH1A1P00352 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms