Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CNOT4O95628 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CNOT4O95628 AL603832.2-201ENST00000566195 2125 ntBASIC13.9□□□□□ -0.18
CNOT4O95628 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.9□□□□□ -0.18
CNOT4O95628 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.9□□□□□ -0.18
CNOT4O95628 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CNOT4O95628 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CNOT4O95628 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CNOT4O95628 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.89□□□□□ -0.19
CNOT4O95628 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.89□□□□□ -0.19
CNOT4O95628 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 AC036164.1-201ENST00000570544 333 ntBASIC13.89□□□□□ -0.19
CNOT4O95628 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 LINC01115-203ENST00000606068 577 ntBASIC13.89□□□□□ -0.19
CNOT4O95628 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 AC093726.1-201ENST00000608064 963 ntBASIC13.89□□□□□ -0.19
CNOT4O95628 AL391069.4-201ENST00000609583 481 ntBASIC13.89□□□□□ -0.19
CNOT4O95628 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CNOT4O95628 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 MYO15B-237ENST00000642007 4893 ntBASIC13.89□□□□□ -0.19
CNOT4O95628 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CNOT4O95628 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.89□□□□□ -0.19
CNOT4O95628 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT4O95628 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 AL607033.1-201ENST00000623900 1599 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CNOT4O95628 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 AC105917.1-201ENST00000506637 2539 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT4O95628 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.88□□□□□ -0.19
CNOT4O95628 GNAQP1-201ENST00000444815 1067 ntBASIC13.88□□□□□ -0.19
CNOT4O95628 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT4O95628 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms