Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
MBD4O95243 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MBD4O95243 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD4O95243 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD4O95243 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 RNU1-114P-201ENST00000365297 166 ntBASIC18.46■□□□□ 0.55
MBD4O95243 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD4O95243 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.46■□□□□ 0.55
MBD4O95243 AC022137.2-201ENST00000503482 481 ntBASIC18.46■□□□□ 0.55
MBD4O95243 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.46■□□□□ 0.55
MBD4O95243 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD4O95243 AL512343.1-201ENST00000605837 169 ntBASIC18.46■□□□□ 0.55
MBD4O95243 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD4O95243 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.46■□□□□ 0.55
MBD4O95243 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
MBD4O95243 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD4O95243 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD4O95243 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MBD4O95243 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MBD4O95243 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.46■□□□□ 0.54
MBD4O95243 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD4O95243 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.45■□□□□ 0.54
MBD4O95243 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.45■□□□□ 0.54
MBD4O95243 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD4O95243 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD4O95243 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 IGHV3-71-201ENST00000523324 359 ntBASIC18.45■□□□□ 0.54
MBD4O95243 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD4O95243 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD4O95243 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.45■□□□□ 0.54
MBD4O95243 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
MBD4O95243 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 AC007787.1-201ENST00000588095 1583 ntBASIC18.45■□□□□ 0.54
MBD4O95243 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD4O95243 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.45■□□□□ 0.54
MBD4O95243 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.45■□□□□ 0.54
MBD4O95243 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD4O95243 AC105917.1-201ENST00000506637 2539 ntBASIC18.45■□□□□ 0.54
MBD4O95243 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD4O95243 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MBD4O95243 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD4O95243 AC112693.3-201ENST00000624819 1983 ntBASIC18.44■□□□□ 0.54
MBD4O95243 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MBD4O95243 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD4O95243 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
MBD4O95243 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms