Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ZNF259P1-201ENST00000407656 1365 ntBASIC13.77□□□□□ -0.21
KDM4BO94953 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.77□□□□□ -0.21
KDM4BO94953 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 LINC00552-201ENST00000625151 2579 ntBASIC13.77□□□□□ -0.21
KDM4BO94953 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.77□□□□□ -0.21
KDM4BO94953 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.77□□□□□ -0.21
KDM4BO94953 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
KDM4BO94953 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.77□□□□□ -0.21
KDM4BO94953 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.77□□□□□ -0.21
KDM4BO94953 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 AGAP7P-201ENST00000582299 2062 ntBASIC13.76□□□□□ -0.21
KDM4BO94953 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 AGAP14-201ENST00000624701 2060 ntBASIC13.76□□□□□ -0.21
KDM4BO94953 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
KDM4BO94953 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.76□□□□□ -0.21
KDM4BO94953 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KDM4BO94953 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 AC112191.1-201ENST00000523689 701 ntBASIC13.76□□□□□ -0.21
KDM4BO94953 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.76□□□□□ -0.21
KDM4BO94953 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 AP002472.1-201ENST00000577490 586 ntBASIC13.76□□□□□ -0.21
KDM4BO94953 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.76□□□□□ -0.21
KDM4BO94953 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.76□□□□□ -0.21
KDM4BO94953 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 LINC00528-201ENST00000600723 2160 ntBASIC13.76□□□□□ -0.21
KDM4BO94953 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KDM4BO94953 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDM4BO94953 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
KDM4BO94953 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.75□□□□□ -0.21
KDM4BO94953 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDM4BO94953 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KDM4BO94953 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms