Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCNKO75909 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCNKO75909 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.54□□□□□ -0.24
CCNKO75909 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCNKO75909 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.54□□□□□ -0.24
CCNKO75909 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.54□□□□□ -0.24
CCNKO75909 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCNKO75909 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.54□□□□□ -0.24
CCNKO75909 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.54□□□□□ -0.24
CCNKO75909 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
CCNKO75909 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.53□□□□□ -0.24
CCNKO75909 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CCNKO75909 MIR4492-201ENST00000581627 80 ntBASIC13.53□□□□□ -0.24
CCNKO75909 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.53□□□□□ -0.24
CCNKO75909 AC139887.4-201ENST00000607877 719 ntBASIC13.53□□□□□ -0.24
CCNKO75909 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.53□□□□□ -0.24
CCNKO75909 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCNKO75909 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCNKO75909 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.53□□□□□ -0.24
CCNKO75909 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.52□□□□□ -0.24
CCNKO75909 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.52□□□□□ -0.24
CCNKO75909 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CCNKO75909 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.52□□□□□ -0.24
CCNKO75909 AC131902.2-201ENST00000566892 2172 ntBASIC13.52□□□□□ -0.24
CCNKO75909 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
CCNKO75909 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CCNKO75909 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCNKO75909 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.52□□□□□ -0.25
CCNKO75909 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCNKO75909 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.52□□□□□ -0.25
CCNKO75909 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCNKO75909 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCNKO75909 KLF4P1-201ENST00000412782 1185 ntBASIC13.52□□□□□ -0.25
CCNKO75909 AL845331.1-201ENST00000424978 1190 ntBASIC13.52□□□□□ -0.25
CCNKO75909 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
CCNKO75909 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCNKO75909 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.52□□□□□ -0.25
CCNKO75909 AL031432.5-201ENST00000641059 760 ntBASIC13.52□□□□□ -0.25
CCNKO75909 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCNKO75909 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.52□□□□□ -0.25
CCNKO75909 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms