Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 INE1-201ENST00000456273 945 ntBASIC13.91□□□□□ -0.18
CXCL13O43927 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCL13O43927 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCL13O43927 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CXCL13O43927 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CXCL13O43927 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CXCL13O43927 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCL13O43927 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 DRD5P1-201ENST00000456605 1438 ntBASIC13.9□□□□□ -0.18
CXCL13O43927 CU639417.3-201ENST00000624240 1404 ntBASIC13.9□□□□□ -0.18
CXCL13O43927 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
CXCL13O43927 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CXCL13O43927 SOCS2P1-201ENST00000417727 557 ntBASIC13.9□□□□□ -0.18
CXCL13O43927 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCL13O43927 KRT17P7-201ENST00000451704 1104 ntBASIC13.9□□□□□ -0.18
CXCL13O43927 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCL13O43927 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCL13O43927 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 AC107373.2-201ENST00000607735 490 ntBASIC13.9□□□□□ -0.18
CXCL13O43927 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 AL035252.4-201ENST00000624174 288 ntBASIC13.9□□□□□ -0.18
CXCL13O43927 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCL13O43927 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL13O43927 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL13O43927 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.9□□□□□ -0.19
CXCL13O43927 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.9□□□□□ -0.19
CXCL13O43927 KRT8P22-201ENST00000562317 1415 ntBASIC13.9□□□□□ -0.19
CXCL13O43927 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL13O43927 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL13O43927 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms