Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH17O14917 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDH17O14917 AC138035.3-201ENST00000622706 2791 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH17O14917 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 SLC7A15P-201ENST00000424028 1363 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 SPDYE19P-201ENST00000338590 713 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH17O14917 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 COX5BP8-201ENST00000416911 349 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH17O14917 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH17O14917 MEIS3P1-201ENST00000495167 958 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH17O14917 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDH17O14917 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH17O14917 TPRX2P-201ENST00000535362 881 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH17O14917 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDH17O14917 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH17O14917 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH17O14917 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 AC087481.3-201ENST00000602886 1894 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 CU639417.3-201ENST00000624240 1404 ntBASIC14.9□□□□□ -0.02
PCDH17O14917 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
PCDH17O14917 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH17O14917 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
PCDH17O14917 OR8S1-201ENST00000310194 1080 ntBASIC14.89□□□□□ -0.03
PCDH17O14917 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.89□□□□□ -0.03
PCDH17O14917 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PCDH17O14917 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.89□□□□□ -0.03
PCDH17O14917 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCDH17O14917 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDH17O14917 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDH17O14917 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH17O14917 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDH17O14917 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH17O14917 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH17O14917 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH17O14917 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms