Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC106881.1-201ENST00000605849 3329 ntBASIC12.51□□□□□ -0.41
UPK2O00526 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 SPDYE7P-202ENST00000420373 878 ntBASIC12.51□□□□□ -0.41
UPK2O00526 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 AC023141.5-201ENST00000458585 616 ntBASIC12.51□□□□□ -0.41
UPK2O00526 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 AC112482.1-201ENST00000492080 688 ntBASIC12.51□□□□□ -0.41
UPK2O00526 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 FGD5P1-202ENST00000614866 2498 ntBASIC12.51□□□□□ -0.41
UPK2O00526 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 CICP11-201ENST00000434745 2827 ntBASIC12.51□□□□□ -0.41
UPK2O00526 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UPK2O00526 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UPK2O00526 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UPK2O00526 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UPK2O00526 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.5□□□□□ -0.41
UPK2O00526 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 SLED1-202ENST00000512051 380 ntBASIC12.5□□□□□ -0.41
UPK2O00526 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.5□□□□□ -0.41
UPK2O00526 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.5□□□□□ -0.41
UPK2O00526 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK2O00526 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.5□□□□□ -0.41
UPK2O00526 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK2O00526 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.5□□□□□ -0.41
UPK2O00526 AL589739.1-201ENST00000607720 493 ntBASIC12.5□□□□□ -0.41
UPK2O00526 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
UPK2O00526 AP001059.3-201ENST00000619053 235 ntBASIC12.5□□□□□ -0.41
UPK2O00526 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK2O00526 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms