Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 AC079776.1-201ENST00000401540 1152 ntBASIC16.19■□□□□ 0.18
SRRM3A6NNA2 SPTLC1P1-201ENST00000447199 261 ntBASIC16.19■□□□□ 0.18
SRRM3A6NNA2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 AL135744.1-201ENST00000565098 629 ntBASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.19■□□□□ 0.18
SRRM3A6NNA2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 HSPA7-201ENST00000445535 1927 ntBASIC16.19■□□□□ 0.18
SRRM3A6NNA2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 ACTL9-202ENST00000612068 1252 ntBASIC16.18■□□□□ 0.18
SRRM3A6NNA2 MIR6080-201ENST00000617359 66 ntBASIC16.18■□□□□ 0.18
SRRM3A6NNA2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.18■□□□□ 0.18
SRRM3A6NNA2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SRRM3A6NNA2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 SPCS2P4-201ENST00000436160 681 ntBASIC16.17■□□□□ 0.18
SRRM3A6NNA2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.17■□□□□ 0.18
SRRM3A6NNA2 IGHV3-72-202ENST00000621503 303 ntBASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 ZBED1P1-201ENST00000502364 1930 ntBASIC16.17■□□□□ 0.18
SRRM3A6NNA2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM3A6NNA2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms