Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 HMGB1P24-201ENST00000611897 328 ntBASIC19.01■□□□□ 0.63
RGPD3A6NKT7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 REXO1L5P-201ENST00000622260 2098 ntBASIC19.01■□□□□ 0.63
RGPD3A6NKT7 MST1L-201ENST00000442552 2185 ntBASIC19■□□□□ 0.63
RGPD3A6NKT7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19■□□□□ 0.63
RGPD3A6NKT7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RGPD3A6NKT7 AL157414.3-201ENST00000624276 1954 ntBASIC19■□□□□ 0.63
RGPD3A6NKT7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 HLA-DQB1-202ENST00000399079 1501 ntBASIC19■□□□□ 0.63
RGPD3A6NKT7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19■□□□□ 0.63
RGPD3A6NKT7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19■□□□□ 0.63
RGPD3A6NKT7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19■□□□□ 0.63
RGPD3A6NKT7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19■□□□□ 0.63
RGPD3A6NKT7 HNRNPA1P58-201ENST00000403629 610 ntBASIC19■□□□□ 0.63
RGPD3A6NKT7 RN7SKP109-201ENST00000410592 316 ntBASIC19■□□□□ 0.63
RGPD3A6NKT7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19■□□□□ 0.63
RGPD3A6NKT7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19■□□□□ 0.63
RGPD3A6NKT7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19■□□□□ 0.63
RGPD3A6NKT7 AL627230.2-201ENST00000613254 655 ntBASIC19■□□□□ 0.63
RGPD3A6NKT7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19■□□□□ 0.63
RGPD3A6NKT7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 AHCYP4-201ENST00000419201 1315 ntBASIC18.99■□□□□ 0.63
RGPD3A6NKT7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 FAM86B3P-203ENST00000523992 854 ntBASIC18.99■□□□□ 0.63
RGPD3A6NKT7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 AC140113.1-201ENST00000603467 169 ntBASIC18.99■□□□□ 0.63
RGPD3A6NKT7 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 AL672207.1-201ENST00000328462 1570 ntBASIC18.99■□□□□ 0.63
RGPD3A6NKT7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.99■□□□□ 0.63
RGPD3A6NKT7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 AC003102.2-201ENST00000589195 1469 ntBASIC18.98■□□□□ 0.63
RGPD3A6NKT7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RGPD3A6NKT7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms