Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 AL023803.2-201ENST00000620080 638 ntBASIC19.15■□□□□ 0.66
LAMB4A4D0S4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 AC005077.2-201ENST00000449786 690 ntBASIC19.14■□□□□ 0.66
LAMB4A4D0S4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.14■□□□□ 0.66
LAMB4A4D0S4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AC006058.4-201ENST00000624016 1670 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AC004899.1-201ENST00000424687 1714 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 E2F3P2-201ENST00000447755 1422 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 REXO1L2P-201ENST00000425429 2069 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AC244394.1-201ENST00000435000 1665 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 RN7SL11P-201ENST00000471305 293 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 GCOM2-201ENST00000509133 1104 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AC009779.1-201ENST00000551138 283 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AC090164.2-201ENST00000611487 516 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 AL162426.1-201ENST00000624141 743 ntBASIC19.14■□□□□ 0.65
LAMB4A4D0S4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LAMB4A4D0S4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 AL596276.2-201ENST00000447525 331 ntBASIC19.13■□□□□ 0.65
LAMB4A4D0S4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 AC005962.1-201ENST00000584100 773 ntBASIC19.13■□□□□ 0.65
LAMB4A4D0S4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 AC020910.5-201ENST00000623668 1865 ntBASIC19.13■□□□□ 0.65
LAMB4A4D0S4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LAMB4A4D0S4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms