Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC006335.1-201ENST00000445200 547 ntBASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 PUDPP3-201ENST00000445368 636 ntBASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 RN7SL555P-201ENST00000584742 339 ntBASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC020922.3-201ENST00000595064 547 ntBASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC090164.2-201ENST00000611487 516 ntBASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL136301.1-201ENST00000615830 422 ntBASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LOC102724428A0A0B4J2F2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 AD000864.1-201ENST00000624076 2295 ntBASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 IQSEC3P1-201ENST00000538799 536 ntBASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 AP003419.4-201ENST00000616071 517 ntBASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LOC102724428A0A0B4J2F2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC112504.1-201ENST00000623415 1841 ntBASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 RN7SKP175-201ENST00000408472 289 ntBASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 CEP164P1-201ENST00000455142 418 ntBASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC100827.2-201ENST00000563214 1194 ntBASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LOC102724428A0A0B4J2F2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms