Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 IER3-202ENST00000376377 1350 ntBASIC14.77□□□□□ -0.04
AP4S1Q9Y587 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 CXCL1P1-201ENST00000502804 216 ntBASIC14.77□□□□□ -0.05
AP4S1Q9Y587 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 AC109635.5-201ENST00000533593 962 ntBASIC14.77□□□□□ -0.05
AP4S1Q9Y587 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 RN7SL850P-201ENST00000579959 291 ntBASIC14.77□□□□□ -0.05
AP4S1Q9Y587 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 AC092135.3-201ENST00000624151 1846 ntBASIC14.77□□□□□ -0.05
AP4S1Q9Y587 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4S1Q9Y587 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.76□□□□□ -0.05
AP4S1Q9Y587 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AC211429.1-201ENST00000415277 523 ntBASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AL513480.1-201ENST00000451731 511 ntBASIC14.76□□□□□ -0.05
AP4S1Q9Y587 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AL450472.2-201ENST00000603663 1156 ntBASIC14.76□□□□□ -0.05
AP4S1Q9Y587 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP4S1Q9Y587 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms