Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 RARRES2P8-201ENST00000566335 367 ntBASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SPDYE9P-201ENST00000570642 692 ntBASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SPDYE10P-202ENST00000612005 668 ntBASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SPDYE8P-202ENST00000612377 668 ntBASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 RN7SL589P-201ENST00000481268 310 ntBASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 SNHG9-202ENST00000564014 471 ntBASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 GPALPP1-207ENST00000611650 899 ntBASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 AC092902.6-201ENST00000641783 218 ntBASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 WASH6P-202ENST00000359512 1437 ntBASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.94■□□□□ 0.46
R3HCC1Q9Y3T6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 CICP17-201ENST00000418553 2377 ntBASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 TIMM8BP1-201ENST00000452384 211 ntBASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 AL691403.2-201ENST00000618460 490 ntBASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
R3HCC1Q9Y3T6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms