Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 AC243562.2-201ENST00000561247 970 ntBASIC13.54□□□□□ -0.24
TREM2Q9NZC2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 AL844908.2-201ENST00000609461 460 ntBASIC13.54□□□□□ -0.24
TREM2Q9NZC2 AC008738.7-201ENST00000609744 511 ntBASIC13.54□□□□□ -0.24
TREM2Q9NZC2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TREM2Q9NZC2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 PIN1P1-201ENST00000412108 996 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC009407.1-201ENST00000568958 598 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AL035252.4-201ENST00000624174 288 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AL033527.5-202ENST00000641632 1098 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AL109936.8-201ENST00000641772 604 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 AC067930.6-201ENST00000623257 4947 ntBASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.53□□□□□ -0.24
TREM2Q9NZC2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.52□□□□□ -0.24
TREM2Q9NZC2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
TREM2Q9NZC2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TREM2Q9NZC2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms