Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 AC010507.1-201ENST00000633895 436 ntBASIC14.28□□□□□ -0.12
CLN6Q9NWW5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 AC007064.4-201ENST00000637740 555 ntBASIC14.28□□□□□ -0.12
CLN6Q9NWW5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.27□□□□□ -0.12
CLN6Q9NWW5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.27□□□□□ -0.12
CLN6Q9NWW5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AC140658.5-201ENST00000438532 169 ntBASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AC098831.1-202ENST00000438821 336 ntBASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AC009947.1-201ENST00000444350 727 ntBASIC14.27□□□□□ -0.13
CLN6Q9NWW5 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 UNC93B6-202ENST00000528242 690 ntBASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLN6Q9NWW5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 AC098859.1-201ENST00000502915 1238 ntBASIC14.26□□□□□ -0.13
CLN6Q9NWW5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 AC023141.13-201ENST00000604991 943 ntBASIC14.26□□□□□ -0.13
CLN6Q9NWW5 AL773604.1-201ENST00000617417 272 ntBASIC14.26□□□□□ -0.13
CLN6Q9NWW5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.26□□□□□ -0.13
CLN6Q9NWW5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms