Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 KRT8P14-201ENST00000414254 1442 ntBASIC18.58■□□□□ 0.56
SALL1Q9NSC2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 AC090616.6-203ENST00000579186 1945 ntBASIC18.58■□□□□ 0.56
SALL1Q9NSC2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SALL1Q9NSC2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AC023310.1-201ENST00000554836 735 ntBASIC18.57■□□□□ 0.56
SALL1Q9NSC2 SAMD11P1-201ENST00000571429 661 ntBASIC18.57■□□□□ 0.56
SALL1Q9NSC2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 MIR6869-201ENST00000619434 62 ntBASIC18.57■□□□□ 0.56
SALL1Q9NSC2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AC138951.2-201ENST00000623455 1161 ntBASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AC006453.4-201ENST00000636949 1252 ntBASIC18.57■□□□□ 0.56
SALL1Q9NSC2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 AL158070.2-201ENST00000623713 1621 ntBASIC18.57■□□□□ 0.56
SALL1Q9NSC2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SALL1Q9NSC2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 MIR4525-201ENST00000580000 75 ntBASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 LINC00554-201ENST00000564841 3011 ntBASIC18.56■□□□□ 0.56
SALL1Q9NSC2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SALL1Q9NSC2 AC092127.1-201ENST00000567093 3455 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms