Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 PPT1-215ENST00000641471 2368 ntBASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 AC106730.1-201ENST00000566722 1090 ntBASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 FAM197Y3-203ENST00000618346 717 ntBASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDHB16Q9NRJ7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
PCDHB16Q9NRJ7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.23
PCDHB16Q9NRJ7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.23
PCDHB16Q9NRJ7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AC134407.2-201ENST00000625089 1978 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 PDPK2P-202ENST00000562415 1191 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AC034105.1-201ENST00000563488 319 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AC117489.1-201ENST00000625169 3217 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms