Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.59■□□□□ 0.57
RTN4Q9NQC3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AL021920.2-201ENST00000624828 1351 ntBASIC18.59■□□□□ 0.57
RTN4Q9NQC3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TSSC2-201ENST00000450217 709 ntBASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AC096582.2-201ENST00000510860 516 ntBASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AC092720.1-201ENST00000562466 447 ntTSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AC116407.4-201ENST00000623319 1061 ntBASIC18.59■□□□□ 0.57
RTN4Q9NQC3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AC148477.4-201ENST00000613430 1793 ntBASIC18.59■□□□□ 0.57
RTN4Q9NQC3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RTN4Q9NQC3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RTN4Q9NQC3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 LINC00982-205ENST00000420957 435 ntBASIC18.58■□□□□ 0.56
RTN4Q9NQC3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 SEPT14P1-201ENST00000458703 648 ntBASIC18.58■□□□□ 0.56
RTN4Q9NQC3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTN4Q9NQC3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTN4Q9NQC3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms