Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF2Q9HAU5 INTS4P1-203ENST00000641008 3683 ntBASIC19.19■□□□□ 0.66
UPF2Q9HAU5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 RPL5P21-201ENST00000404620 815 ntBASIC19.18■□□□□ 0.66
UPF2Q9HAU5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 UNC93B7-201ENST00000509439 705 ntBASIC19.18■□□□□ 0.66
UPF2Q9HAU5 RNA5SP410-201ENST00000516285 106 ntBASIC19.18■□□□□ 0.66
UPF2Q9HAU5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 AL031008.1-201ENST00000619963 541 ntBASIC19.18■□□□□ 0.66
UPF2Q9HAU5 AC004877.2-201ENST00000623941 599 ntBASIC19.18■□□□□ 0.66
UPF2Q9HAU5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF2Q9HAU5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 AL136982.4-201ENST00000437689 1740 ntBASIC19.17■□□□□ 0.66
UPF2Q9HAU5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 MIR7706-201ENST00000613747 67 ntBASIC19.17■□□□□ 0.66
UPF2Q9HAU5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC19.17■□□□□ 0.66
UPF2Q9HAU5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF2Q9HAU5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AL031284.1-201ENST00000419297 478 ntBASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AL139010.1-201ENST00000454878 894 ntBASIC19.16■□□□□ 0.66
UPF2Q9HAU5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 RNA5SP415-201ENST00000517246 115 ntBASIC19.16■□□□□ 0.66
UPF2Q9HAU5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.16■□□□□ 0.66
UPF2Q9HAU5 AL138918.1-201ENST00000568306 659 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms