Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LRRC40Q9H9A6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC40Q9H9A6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC092580.3-201ENST00000430932 139 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 ZNF890P-202ENST00000530367 1156 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 LINC01115-203ENST00000606068 577 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC139530.3-201ENST00000620344 690 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AF228730.6-201ENST00000641497 218 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AC084121.3-201ENST00000641716 218 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 AL109936.8-201ENST00000641772 604 ntBASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC40Q9H9A6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms