Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL589739.1-201ENST00000607720 493 ntBASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 AL139327.4-201ENST00000612362 153 ntBASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 AC004790.1-201ENST00000612686 536 ntBASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 AC023510.2-201ENST00000622162 746 ntBASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 AL031430.1-201ENST00000642067 1039 ntBASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCAF1Q9H7N4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AC109635.5-201ENST00000533593 962 ntBASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AGER-214ENST00000538695 487 ntTSL 2 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AL138918.1-201ENST00000568306 659 ntBASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 MIR3615-201ENST00000581999 87 ntBASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 ZNF92P2-201ENST00000600543 1059 ntBASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 AC023157.3-201ENST00000619086 2088 ntBASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 CROCCP1-201ENST00000426910 5675 ntBASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCAF1Q9H7N4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 SLC25A1P3-201ENST00000395415 828 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 RPL37AP1-201ENST00000412502 279 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AL355994.2-201ENST00000447882 704 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 MYCLP2-201ENST00000449268 967 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AC007389.4-201ENST00000454674 793 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 AC243960.2-201ENST00000600996 747 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC23.49■■□□□ 1.35
SCAF1Q9H7N4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms