Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 VDAC1P1-201ENST00000439229 848 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 HLA-J-204ENST00000495278 958 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 RCC2P8-201ENST00000502779 1035 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 RTN3P1-201ENST00000536295 711 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AC012044.1-201ENST00000603431 297 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AC073352.2-201ENST00000609385 439 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 AC132192.2-201ENST00000596206 1147 ntBASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP4Q9C0A0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 TNRC18P3-201ENST00000441896 2691 ntBASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 AC026316.1-201ENST00000398900 414 ntBASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms