Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 FTLP10-202ENST00000505798 471 ntBASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 DUX4L47-201ENST00000566374 394 ntBASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AC079336.7-201ENST00000623428 1078 ntBASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 CLUHP2-201ENST00000426660 1303 ntBASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AC008132.1-202ENST00000342005 1389 ntBASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RTFDC1Q9BY42 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 AC253536.4-201ENST00000440539 267 ntBASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 RN7SL11P-201ENST00000471305 293 ntBASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 FGFR3P5-201ENST00000564496 886 ntBASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTFDC1Q9BY42 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AC104457.1-201ENST00000401024 814 ntBASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AC013355.1-201ENST00000562625 723 ntBASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AC026740.1-201ENST00000607068 791 ntBASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 AC010491.1-201ENST00000563101 2797 ntBASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.61■□□□□ 0.57
RTFDC1Q9BY42 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTFDC1Q9BY42 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms