Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC94Q9BW85 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 AL390955.2-201ENST00000603032 514 ntBASIC17.73■□□□□ 0.43
CCDC94Q9BW85 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.73■□□□□ 0.43
CCDC94Q9BW85 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC94Q9BW85 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 BASP1P1-201ENST00000430708 665 ntBASIC17.72■□□□□ 0.43
CCDC94Q9BW85 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 RNA5SP421-201ENST00000516864 134 ntBASIC17.72■□□□□ 0.43
CCDC94Q9BW85 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 TMBIM7P-203ENST00000641617 1718 ntBASIC17.72■□□□□ 0.43
CCDC94Q9BW85 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC94Q9BW85 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC94Q9BW85 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC94Q9BW85 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC94Q9BW85 AC006504.5-208ENST00000588784 2401 ntBASIC17.71■□□□□ 0.43
CCDC94Q9BW85 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC94Q9BW85 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms