Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 CLK3P2-201ENST00000427566 1453 ntBASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRNP25Q9BV90 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 MIR770-201ENST00000390219 98 ntBASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRNP25Q9BV90 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AGAP7P-201ENST00000582299 2062 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AGAP14-201ENST00000624701 2060 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 INGX-202ENST00000489074 768 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 DOC2GP-202ENST00000514950 1163 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 RNA5SP421-201ENST00000516864 134 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC023310.3-201ENST00000557027 670 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC100756.1-201ENST00000562736 682 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC138749.3-201ENST00000567691 622 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC116165.1-201ENST00000611806 668 ntBASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRNP25Q9BV90 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRNP25Q9BV90 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms