Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.05■□□□□ 0.8
ABCA3Q99758 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.05■□□□□ 0.8
ABCA3Q99758 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.05■□□□□ 0.8
ABCA3Q99758 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 MIR3188-201ENST00000583494 85 ntBASIC20.05■□□□□ 0.8
ABCA3Q99758 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
ABCA3Q99758 AC103810.10-201ENST00000606504 343 ntBASIC20.05■□□□□ 0.8
ABCA3Q99758 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCA3Q99758 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ABCA3Q99758 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.04■□□□□ 0.8
ABCA3Q99758 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.04■□□□□ 0.8
ABCA3Q99758 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ABCA3Q99758 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ABCA3Q99758 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.04■□□□□ 0.8
ABCA3Q99758 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ABCA3Q99758 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.04■□□□□ 0.8
ABCA3Q99758 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ABCA3Q99758 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC20.04■□□□□ 0.8
ABCA3Q99758 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 PSMD4P1-201ENST00000433951 1109 ntBASIC20.04■□□□□ 0.8
ABCA3Q99758 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC20.04■□□□□ 0.8
ABCA3Q99758 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.04■□□□□ 0.8
ABCA3Q99758 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC20.04■□□□□ 0.8
ABCA3Q99758 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.04■□□□□ 0.8
ABCA3Q99758 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 AL596087.1-201ENST00000400979 1969 ntBASIC20.04■□□□□ 0.8
ABCA3Q99758 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 AC112504.1-201ENST00000623415 1841 ntBASIC20.04■□□□□ 0.8
ABCA3Q99758 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.04■□□□□ 0.8
ABCA3Q99758 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCA3Q99758 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.03■□□□□ 0.8
ABCA3Q99758 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ABCA3Q99758 AC080080.1-201ENST00000625121 2420 ntBASIC20.03■□□□□ 0.8
ABCA3Q99758 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.03■□□□□ 0.8
ABCA3Q99758 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ABCA3Q99758 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ABCA3Q99758 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ABCA3Q99758 LYPLA2P1-203ENST00000447689 696 ntBASIC20.03■□□□□ 0.8
ABCA3Q99758 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC20.03■□□□□ 0.8
ABCA3Q99758 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.03■□□□□ 0.8
ABCA3Q99758 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.03■□□□□ 0.8
ABCA3Q99758 AL118516.1-201ENST00000564152 670 ntBASIC20.03■□□□□ 0.8
ABCA3Q99758 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.03■□□□□ 0.8
ABCA3Q99758 NUDT4P2-201ENST00000578341 546 ntBASIC20.03■□□□□ 0.8
ABCA3Q99758 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ABCA3Q99758 AC092299.1-201ENST00000632679 757 ntBASIC20.03■□□□□ 0.8
ABCA3Q99758 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.03■□□□□ 0.8
ABCA3Q99758 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.03■□□□□ 0.8
ABCA3Q99758 KRT18P9-201ENST00000604826 1300 ntBASIC20.03■□□□□ 0.8
ABCA3Q99758 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCA3Q99758 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ABCA3Q99758 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
ABCA3Q99758 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCA3Q99758 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.02■□□□□ 0.8
ABCA3Q99758 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.02■□□□□ 0.8
ABCA3Q99758 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCA3Q99758 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 AC022211.2-201ENST00000585075 2527 ntBASIC20.02■□□□□ 0.8
ABCA3Q99758 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCA3Q99758 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms