Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 PDIA3P2-201ENST00000428073 158 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 AC006335.1-201ENST00000445200 547 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 AC013355.1-201ENST00000562625 723 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 AC022748.3-201ENST00000621828 275 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 AL691432.1-201ENST00000596308 1422 ntBASIC16.75■□□□□ 0.27
LRCH3Q96II8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH3Q96II8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH3Q96II8 DOC2GP-204ENST00000639052 2548 ntBASIC16.74■□□□□ 0.27
LRCH3Q96II8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRCH3Q96II8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH3Q96II8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 AC012362.1-201ENST00000434906 739 ntBASIC16.73■□□□□ 0.27
LRCH3Q96II8 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 RPL7P35-201ENST00000446943 740 ntBASIC16.73■□□□□ 0.27
LRCH3Q96II8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH3Q96II8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH3Q96II8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms