Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC092580.3-201ENST00000430932 139 ntBASIC15.84■□□□□ 0.13
RTP4Q96DX8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC002472.2-201ENST00000442739 958 ntBASIC15.84■□□□□ 0.13
RTP4Q96DX8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC190387.1-201ENST00000551683 408 ntBASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.84■□□□□ 0.13
RTP4Q96DX8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTP4Q96DX8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTP4Q96DX8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RTP4Q96DX8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTP4Q96DX8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.83■□□□□ 0.13
RTP4Q96DX8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTP4Q96DX8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RTP4Q96DX8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 UGT1A2P-201ENST00000454886 866 ntBASIC15.83■□□□□ 0.12
RTP4Q96DX8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 AC097493.3-201ENST00000509725 367 ntBASIC15.83■□□□□ 0.12
RTP4Q96DX8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 AC092337.1-201ENST00000568699 1129 ntBASIC15.83■□□□□ 0.12
RTP4Q96DX8 RN7SL204P-201ENST00000582831 262 ntBASIC15.83■□□□□ 0.12
RTP4Q96DX8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.83■□□□□ 0.12
RTP4Q96DX8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTP4Q96DX8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 AC232323.1-201ENST00000540724 2099 ntBASIC15.82■□□□□ 0.12
RTP4Q96DX8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 REXO1L5P-201ENST00000622260 2098 ntBASIC15.82■□□□□ 0.12
RTP4Q96DX8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms