Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXRED1Q96CU9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXRED1Q96CU9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXRED1Q96CU9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
FOXRED1Q96CU9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
FOXRED1Q96CU9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 MIR1233-2-201ENST00000408138 82 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 MIR1233-1-201ENST00000408722 82 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 FAM8A3P-201ENST00000427218 844 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 MKNK2P1-201ENST00000437526 628 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 RARRES2P8-201ENST00000566335 367 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AC026979.3-201ENST00000607315 403 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 C20orf181-201ENST00000623918 480 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AC139749.1-202ENST00000617529 3139 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AKAP8P1-201ENST00000434743 1349 ntBASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
FOXRED1Q96CU9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 FAM220BP-201ENST00000377689 816 ntBASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.61□□□□□ -0.23
FOXRED1Q96CU9 UPF3AP3-201ENST00000420996 769 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms