Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN23Q96B33 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 FGFR3P1-201ENST00000449999 601 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 RN7SL181P-201ENST00000462921 277 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 RN7SL818P-201ENST00000485099 259 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 RTN3P1-201ENST00000536295 711 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 AC084364.1-201ENST00000551967 1556 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 AC100827.2-201ENST00000563214 1194 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 MIR4683-201ENST00000579659 81 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 RN7SL725P-201ENST00000606439 259 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 AL136301.1-201ENST00000615830 422 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 AC018695.7-201ENST00000624587 2492 ntBASIC15.3■□□□□ 0.04
CLDN23Q96B33 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN23Q96B33 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN23Q96B33 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 AC124067.4-201ENST00000519691 2379 ntBASIC15.29■□□□□ 0.04
CLDN23Q96B33 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 FKBP4P6-201ENST00000457486 1332 ntBASIC15.29■□□□□ 0.04
CLDN23Q96B33 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 FAM58BP-201ENST00000439056 645 ntBASIC15.29■□□□□ 0.04
CLDN23Q96B33 RPL18P13-201ENST00000478088 569 ntBASIC15.29■□□□□ 0.04
CLDN23Q96B33 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 MIR4754-201ENST00000582477 89 ntBASIC15.29■□□□□ 0.04
CLDN23Q96B33 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN23Q96B33 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 AC106820.2-201ENST00000563775 3264 ntBASIC15.29■□□□□ 0.04
CLDN23Q96B33 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN23Q96B33 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms