Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S1Q92572 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.78□□□□□ -0.2
AP3S1Q92572 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S1Q92572 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AP3S1Q92572 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S1Q92572 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S1Q92572 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S1Q92572 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S1Q92572 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S1Q92572 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
AP3S1Q92572 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.77□□□□□ -0.21
AP3S1Q92572 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 NUS1P2-201ENST00000417358 873 ntBASIC13.77□□□□□ -0.21
AP3S1Q92572 RBM17P3-201ENST00000417687 1192 ntBASIC13.77□□□□□ -0.21
AP3S1Q92572 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.77□□□□□ -0.21
AP3S1Q92572 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.77□□□□□ -0.21
AP3S1Q92572 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.77□□□□□ -0.21
AP3S1Q92572 AC011467.4-201ENST00000594891 528 ntBASIC13.77□□□□□ -0.21
AP3S1Q92572 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S1Q92572 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S1Q92572 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
AP3S1Q92572 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC131212.3-201ENST00000624087 4219 ntBASIC13.76□□□□□ -0.21
AP3S1Q92572 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC152010.1-201ENST00000415779 2006 ntBASIC13.76□□□□□ -0.21
AP3S1Q92572 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP3S1Q92572 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
AP3S1Q92572 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S1Q92572 ELK2BP-201ENST00000415014 1224 ntBASIC13.76□□□□□ -0.21
AP3S1Q92572 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.76□□□□□ -0.21
AP3S1Q92572 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms