Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.51■□□□□ 0.07
CKAP2Q8WWK9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 AC073389.1-201ENST00000595595 795 ntBASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.5■□□□□ 0.07
CKAP2Q8WWK9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 IGLL3P-201ENST00000412472 434 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 TSPY19P-201ENST00000418461 509 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AL450487.1-201ENST00000426799 995 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AC140658.5-201ENST00000438532 169 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 TSPY18P-201ENST00000441642 509 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AC012640.2-201ENST00000561606 901 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 SPTSSB-204ENST00000617024 1292 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 AL607033.1-201ENST00000623900 1599 ntBASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.49■□□□□ 0.07
CKAP2Q8WWK9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms