Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 FGD5P1-202ENST00000614866 2498 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AC036164.1-201ENST00000570544 333 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AC099568.2-201ENST00000609194 695 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AJ011932.1-201ENST00000621707 465 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AC093525.8-201ENST00000624099 1342 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 SLC7A15P-201ENST00000424028 1363 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 AC007787.1-201ENST00000588095 1583 ntBASIC16.59■□□□□ 0.25
LMO3Q8TAP4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO3Q8TAP4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.58■□□□□ 0.25
LMO3Q8TAP4 LINC02228-204ENST00000642115 2962 ntBASIC16.58■□□□□ 0.24
LMO3Q8TAP4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.58■□□□□ 0.24
LMO3Q8TAP4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO3Q8TAP4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO3Q8TAP4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms