Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC011270.2-201ENST00000624293 2550 ntBASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 FAM207CP-201ENST00000443486 507 ntBASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AL589987.1-201ENST00000453380 819 ntBASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 BTBD7P1-201ENST00000447253 1453 ntBASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 LINC00528-201ENST00000600723 2160 ntBASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 MROH4P-201ENST00000431302 1578 ntBASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 AC190387.1-201ENST00000551683 408 ntBASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 LINC02560-201ENST00000596379 459 ntBASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 AC025181.2-201ENST00000606994 802 ntBASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 AC008761.3-201ENST00000624803 892 ntBASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDH19Q8TAB3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 AC022144.1-201ENST00000602255 1580 ntBASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH19Q8TAB3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms