Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF439Q8NDP4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF439Q8NDP4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF439Q8NDP4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AL607033.1-201ENST00000623900 1599 ntBASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 MTND6P24-201ENST00000440466 518 ntBASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AC069262.1-201ENST00000539058 672 ntBASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AL079307.3-201ENST00000556114 283 ntBASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AL596442.2-201ENST00000610240 980 ntBASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 LINC00628-201ENST00000628516 1289 ntBASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF439Q8NDP4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF439Q8NDP4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AC109322.1-201ENST00000524499 1264 ntBASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF439Q8NDP4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms