Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 MIR4649-201ENST00000582839 64 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 TBC1D3J-201ENST00000620719 1426 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 AL592424.1-201ENST00000563624 1536 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 AC005740.2-201ENST00000511085 419 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 AC027139.1-201ENST00000565286 951 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 FTLP5-201ENST00000586853 534 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 AC020922.3-201ENST00000595064 547 ntBASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCDC168Q8NDH2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 FAM90A2P-201ENST00000511144 1395 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 FAM90A25P-201ENST00000528404 1395 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AC073150.1-201ENST00000450406 1084 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AC010234.1-201ENST00000494599 870 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 SAMD11P1-201ENST00000571429 661 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 ENPP7P14-201ENST00000621765 1040 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AC138932.1-201ENST00000534164 6830 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 POM121L8P-201ENST00000417732 1281 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 POM121L9P-203ENST00000441984 1285 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AP002803.1-201ENST00000528836 498 ntBASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCDC168Q8NDH2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ISCA2P1-201ENST00000425548 448 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms