Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 AC138035.3-201ENST00000622706 2791 ntBASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 UGT1A2P-201ENST00000454886 866 ntBASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 DOC2GP-202ENST00000514950 1163 ntBASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 AC009118.2-201ENST00000613275 655 ntBASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF2Q8N5M1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 TPRX2P-201ENST00000535362 881 ntBASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AL109954.1-202ENST00000564051 2148 ntBASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AL355385.1-201ENST00000606123 409 ntBASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AC004790.1-201ENST00000612686 536 ntBASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.96■□□□□ 0.15
ATPAF2Q8N5M1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
ATPAF2Q8N5M1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms