Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 AL137783.1-201ENST00000623494 1896 ntBASIC23.95■■□□□ 1.43
VPS8Q8N3P4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC23.95■■□□□ 1.43
VPS8Q8N3P4 LILRP1-201ENST00000444199 1370 ntBASIC23.95■■□□□ 1.42
VPS8Q8N3P4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 CD8B2-202ENST00000417670 633 ntBASIC23.95■■□□□ 1.42
VPS8Q8N3P4 AC244107.1-201ENST00000442033 332 ntBASIC23.95■■□□□ 1.42
VPS8Q8N3P4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC23.95■■□□□ 1.42
VPS8Q8N3P4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 AC092384.3-202ENST00000564646 2873 ntBASIC23.95■■□□□ 1.42
VPS8Q8N3P4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS8Q8N3P4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 AC079316.1-201ENST00000548397 411 ntBASIC23.94■■□□□ 1.42
VPS8Q8N3P4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 CICP6-201ENST00000457191 2729 ntBASIC23.94■■□□□ 1.42
VPS8Q8N3P4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 PCDHGB8P-201ENST00000502926 1973 ntBASIC23.94■■□□□ 1.42
VPS8Q8N3P4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 WASH3P-207ENST00000560956 1394 ntBASIC23.94■■□□□ 1.42
VPS8Q8N3P4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 CLUHP2-201ENST00000426660 1303 ntBASIC23.94■■□□□ 1.42
VPS8Q8N3P4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VPS8Q8N3P4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 CNN2P10-201ENST00000443067 918 ntBASIC23.93■■□□□ 1.42
VPS8Q8N3P4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 RNA5SP412-201ENST00000516234 123 ntBASIC23.93■■□□□ 1.42
VPS8Q8N3P4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AC009542.2-202ENST00000619004 1067 ntBASIC23.93■■□□□ 1.42
VPS8Q8N3P4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AC073347.1-201ENST00000421633 2643 ntBASIC23.93■■□□□ 1.42
VPS8Q8N3P4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AC008741.2-201ENST00000612792 3115 ntBASIC23.93■■□□□ 1.42
VPS8Q8N3P4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms