Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AL138799.1-201ENST00000448213 1675 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AL512384.1-201ENST00000406683 331 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AC005034.1-201ENST00000426657 489 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AC132938.2-201ENST00000579188 680 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AL645728.2-202ENST00000641679 227 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 AL591163.1-201ENST00000641757 987 ntBASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C9orf40Q8IXQ3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CR383656.12-201ENST00000549567 513 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC010319.3-201ENST00000597028 470 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AL035252.4-201ENST00000624174 288 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC005252.2-201ENST00000624630 1141 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC073347.1-201ENST00000421633 2643 ntBASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.3□□□□□ -0.12
C9orf40Q8IXQ3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C9orf40Q8IXQ3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms