Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 USP32P1-208ENST00000506594 1164 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 PTP4A1P2-201ENST00000546033 454 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AC106886.1-201ENST00000568660 600 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CLUHP6-201ENST00000580789 941 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AC093813.1-201ENST00000605066 256 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AL512343.1-201ENST00000605837 169 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AC005252.2-201ENST00000624630 1141 ntBASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCN4BQ8IWT1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AC068587.3-201ENST00000526613 355 ntBASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AC233724.13-201ENST00000598383 410 ntBASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AC025181.2-201ENST00000606994 802 ntBASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 AL365203.3-201ENST00000609742 2057 ntBASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SCN4BQ8IWT1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 MIR658-201ENST00000385210 100 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms