Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 CICP13-201ENST00000422015 2789 ntBASIC14.96□□□□□ -0.01
RAB43Q86YS6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 MEIS3P1-201ENST00000495167 958 ntBASIC14.96□□□□□ -0.01
RAB43Q86YS6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB43Q86YS6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB43Q86YS6 AL592424.1-201ENST00000563624 1536 ntBASIC14.96□□□□□ -0.02
RAB43Q86YS6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.02
RAB43Q86YS6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB43Q86YS6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB43Q86YS6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB43Q86YS6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB43Q86YS6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB43Q86YS6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.96□□□□□ -0.02
RAB43Q86YS6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 IGHV3-71-201ENST00000523324 359 ntBASIC14.95□□□□□ -0.02
RAB43Q86YS6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 MIR6752-201ENST00000618442 71 ntBASIC14.95□□□□□ -0.02
RAB43Q86YS6 IGHV3-72-202ENST00000621503 303 ntBASIC14.95□□□□□ -0.02
RAB43Q86YS6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB43Q86YS6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB43Q86YS6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB43Q86YS6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB43Q86YS6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB43Q86YS6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB43Q86YS6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RAB43Q86YS6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB43Q86YS6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RAB43Q86YS6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB43Q86YS6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB43Q86YS6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms