Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 AC112492.5-201ENST00000421897 457 ntBASIC18.45■□□□□ 0.54
CTR9Q6PD62 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 AC106886.1-201ENST00000568660 600 ntBASIC18.45■□□□□ 0.54
CTR9Q6PD62 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.45■□□□□ 0.54
CTR9Q6PD62 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CTR9Q6PD62 TSPY26P-202ENST00000565928 3884 ntBASIC18.45■□□□□ 0.54
CTR9Q6PD62 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTR9Q6PD62 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 MSTO2P-201ENST00000314835 1709 ntBASIC18.44■□□□□ 0.54
CTR9Q6PD62 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 HILS1-202ENST00000545329 423 ntBASIC18.44■□□□□ 0.54
CTR9Q6PD62 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 AC015936.2-201ENST00000593177 259 ntBASIC18.44■□□□□ 0.54
CTR9Q6PD62 AC093813.1-201ENST00000605066 256 ntBASIC18.44■□□□□ 0.54
CTR9Q6PD62 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 AC099063.4-201ENST00000641099 1602 ntBASIC18.44■□□□□ 0.54
CTR9Q6PD62 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTR9Q6PD62 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.44■□□□□ 0.54
CTR9Q6PD62 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.43■□□□□ 0.54
CTR9Q6PD62 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 ARSEP1-201ENST00000420443 635 ntBASIC18.43■□□□□ 0.54
CTR9Q6PD62 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 TDH-203ENST00000531764 1110 ntBASIC18.43■□□□□ 0.54
CTR9Q6PD62 KRT17P8-201ENST00000540749 863 ntBASIC18.43■□□□□ 0.54
CTR9Q6PD62 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 BTNL10-201ENST00000595971 695 ntBASIC18.43■□□□□ 0.54
CTR9Q6PD62 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTR9Q6PD62 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTR9Q6PD62 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms