Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 AC005034.1-201ENST00000426657 489 ntBASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 AL391069.4-201ENST00000609583 481 ntBASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 CTBP2P3-201ENST00000585629 1255 ntBASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AC093726.1-201ENST00000608064 963 ntBASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AC099568.2-201ENST00000609194 695 ntBASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AL035252.4-201ENST00000624174 288 ntBASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RFWD3Q6PCD5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 TOMM22P5-201ENST00000416399 439 ntBASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 ELK1P1-201ENST00000485699 580 ntBASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms