Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC099568.2-201ENST00000609194 695 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 AL391825.1-201ENST00000457671 1364 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 AC023908.3-201ENST00000564211 3047 ntBASIC16.37■□□□□ 0.21
RNF43Q68DV7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF43Q68DV7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF43Q68DV7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 NFIC-211ENST00000641145 8399 ntBASIC16.36■□□□□ 0.21
RNF43Q68DV7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 GNAQP1-201ENST00000444815 1067 ntBASIC16.36■□□□□ 0.21
RNF43Q68DV7 AL589987.1-201ENST00000453380 819 ntBASIC16.36■□□□□ 0.21
RNF43Q68DV7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 AC106886.1-201ENST00000568660 600 ntBASIC16.36■□□□□ 0.21
RNF43Q68DV7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF43Q68DV7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF43Q68DV7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.35■□□□□ 0.21
RNF43Q68DV7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms