Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC027237.1-201ENST00000560942 655 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 AC087045.2-201ENST00000606279 1003 ntBASIC10.17□□□□□ -0.78
VPS13DQ5THJ4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 MIR1227-201ENST00000408484 88 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AL008707.1-201ENST00000422498 534 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 RN7SL67P-201ENST00000492147 296 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AC026803.1-201ENST00000569130 274 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 RN7SL818P-201ENST00000485099 259 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 RN7SL725P-201ENST00000606439 259 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AC105137.3-201ENST00000617588 984 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AL008718.2-201ENST00000609206 1313 ntBASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
VPS13DQ5THJ4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC005962.1-201ENST00000584100 773 ntBASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC103691.2-201ENST00000618824 433 ntBASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC009560.1-201ENST00000620208 434 ntBASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 CD164-210ENST00000512821 964 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 SCARNA21-201ENST00000517026 139 ntBASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 AC005632.3-201ENST00000605544 308 ntBASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13DQ5THJ4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms