Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 MYO15B-237ENST00000642007 4893 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 FAM58DP-201ENST00000428076 619 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AL512356.2-201ENST00000546955 174 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AC061975.2-201ENST00000581722 295 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AGAP7P-201ENST00000582299 2062 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AGAP14-201ENST00000624701 2060 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 AC007686.3-201ENST00000619017 3487 ntBASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATPAF1Q5TC12 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 AP3S2-216ENST00000617003 1561 ntBASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 HLA-J-203ENST00000494367 1087 ntBASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 ALG1L8P-201ENST00000533887 760 ntBASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 AL596442.2-201ENST00000610240 980 ntBASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 GPALPP1-207ENST00000611650 899 ntBASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms