Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 ENPP7P14-201ENST00000621765 1040 ntBASIC18.98■□□□□ 0.63
CCDC93Q567U6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 AC007950.2-201ENST00000615045 2347 ntBASIC18.98■□□□□ 0.63
CCDC93Q567U6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.98■□□□□ 0.63
CCDC93Q567U6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC93Q567U6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.97■□□□□ 0.63
CCDC93Q567U6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 MIR33B-201ENST00000385104 96 ntBASIC18.97■□□□□ 0.63
CCDC93Q567U6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 MAGEA5-201ENST00000446757 942 ntBASIC18.97■□□□□ 0.63
CCDC93Q567U6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 ME2P1-201ENST00000426028 1970 ntBASIC18.97■□□□□ 0.63
CCDC93Q567U6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC93Q567U6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CCDC93Q567U6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 FAM8A4P-201ENST00000435433 1213 ntBASIC18.96■□□□□ 0.63
CCDC93Q567U6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CCDC93Q567U6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC93Q567U6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms